Projects

Vec2SPARQL

Integrating SPARQL queries and knowledge graph embeddings

AberOWL

AberOWL ontology repository and semantic search engine

DeepGO

DeepGO is a novel method for predicting protein functions using protein sequences and protein-protein interaction (PPI) networks.

Selected Publications

MotivationFunction annotations of gene products, and phenotype annotations ofgenotypes, provide valuable information aboutmolecular …

Motivation A large number of protein sequences are becoming available through theapplication of novel high-throughput …

BackgroundOntologies are widely used as metadata in biological and biomedicaldatasets. Measures of semantic similarity …

Recent Publications

Tomato is the most economically importanthorticultural crop used as a model to study plantbiology and particularly fruitdevelopment. …

Discriminating the causative disease variant(s)for individuals with inherited or de novo mutationspresents one of the main challenges …

Recent & Upcoming Talks

Contact

  • 4700 KAUST, Thuwal, Kingdom of Saudi Arabia